GEPAS: A web-based resource for microarray gene expression data analysis

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dc.contributor.author Herrero, Javier
dc.contributor.author Al-Shahrour, Fátima
dc.contributor.author Díaz-Uriarte, Ramón
dc.contributor.author Mateos, Álvaro
dc.contributor.author Vaquerizas, Juan M.
dc.contributor.author Santoyo, Javier
dc.contributor.author Dopazo, Joaquín
dc.contributor.other UAM. Departamento de Bioquímica es_ES
dc.date.accessioned 2017-05-24T14:08:55Z
dc.date.available 2017-05-24T14:08:55Z
dc.date.issued 2003-07-01
dc.identifier.citation Nucleic Acids Research 31.13 (2003): 3461–3467 en_US
dc.identifier.issn 0305-1048 (print) es_ES
dc.identifier.issn 1362-4962 (online) es_ES
dc.identifier.uri http://hdl.handle.net/10486/678304
dc.description.abstract We present a web-based pipeline for microarray gene expression profile analysis, GEPAS, which stands for Gene Expression Profile Analysis Suite (http://gepas.bioinfo.cnio.es). GEPAS is composed of different interconnected modules which include tools for data pre-processing, two-conditions comparison, unsupervised and supervised clustering (which include some of the most popular methods as well as home made algorithms) and several tests for differential gene expression among different classes, continuous variables or survival analysis. A multiple purpose tool for data mining, based on Gene Ontology, is also linked to the tools, which constitutes a very convenient way of analysing clustering results. On-line tutorials are available from our main web server (http://bioinfo.cnio.es). en_US
dc.description.sponsorship F.A. is supported by grant BIO2001-0068 from MCYT, J.H. is supported by a CNIO fellowship, A.M. is supported by a IBM fellowship, R.D.U. is supported by a Ramón y Cajal research contract from the MCyT. en_US
dc.format.extent 7 pag. es_ES
dc.format.mimetype application/pdf en
dc.language.iso eng en
dc.publisher Oxford University Press en_US
dc.relation.ispartof Nucleic Acids Research en_US
dc.rights © Oxford University Press 2003 en_US
dc.subject.other Microarray gene expression en_US
dc.subject.other GEPAS en_US
dc.subject.other Analysis en_US
dc.subject.other Data en_US
dc.subject.other Gene Ontology en_US
dc.title GEPAS: A web-based resource for microarray gene expression data analysis en_US
dc.type article en
dc.subject.eciencia Medicina es_ES
dc.relation.publisherversion http://dx.doi.org/10.1093/nar/gkg591 Nucleic Acids es_ES
dc.identifier.doi 10.1093/nar/gkg591 es_ES
dc.identifier.publicationfirstpage 3461 es_ES
dc.identifier.publicationissue 13 es_ES
dc.identifier.publicationlastpage 3467 es_ES
dc.identifier.publicationvolume 31 es_ES
dc.relation.projectID Gobierno de España. BIO2001-0068 es_ES
dc.type.version info:eu-repo/semantics/publishedVersion en
dc.rights.accessRights openAccess en


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