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Automatic Adaptation of Model Neurons and Connections to Build Hybrid Circuits with Living Networks

Author
Reyes Sánchez, Manueluntranslated; Amaducci Szwarc, Rodrigo Vicenteuntranslated; Elices Ocón, Irene del Rosariountranslated; Rodríguez Ortiz, Francisco Borjauntranslated; Varona Martínez, Pablountranslated
Entity
UAM. Departamento de Ingeniería Informática
Publisher
Springer Nature
Date
2020-06-01
Citation
10.1007/s12021-019-09440-z
Reyes-Sanchez, M., Amaducci, R., Elices, I., Rodríguez Ortiz, F. B. and Varona, P., Automatic Adaptation of Model Neurons and Connections to Build Hybrid Circuits with Living Networks. Neuroinform 18 (2020): 377–393
 
 
 
ISSN
1539-2791 (print); 1559-0089 (online)
DOI
10.1007/s12021-019-09440-z
Funded by
This work was supported by MINECO/ FEDER PGC2018-095895-B-I00, DPI2015-65833-P, TIN2017-84452-R and ONRG grant N62909-14-1-N279
Project
Gobierno de España. PGC2018-095895-B-I00; Gobierno de España. DPI2015-65833-P
Editor's Version
https://doi.org/10.1007/s12021-019-09440-z
Subjects
Closed-loop neuroscience; Dynamic clamp; Experiment automation; Hybrid circuit real-time dynamic adaptation; Interacting living and model neurons; Informática
URI
http://hdl.handle.net/10486/703150
Rights
© Springer Nature

Abstract

Hybrid circuits built by creating mono- or bi-directional interactions among living cells and model neurons and synapses are an effective way to study neuron, synaptic and neural network dynamics. However, hybrid circuit technology has been largely underused in the context of neuroscience studies mainly because of the inherent difficulty in implementing and tuning this type of interactions. In this paper, we present a set of algorithms for the automatic adaptation of model neurons and connections in the creation of hybrid circuits with living neural networks. The algorithms perform model time and amplitude scaling, real-time drift adaptation, goal-driven synaptic and model tuning/calibration and also automatic parameter mapping. These algorithms have been implemented in RTHybrid, an open-source library that works with hard real-time constraints. We provide validation examples by building hybrid circuits in a central pattern generator. The results of the validation experiments show that the proposed dynamic adaptation facilitates closed-loop communication among living and artificial model neurons and connections, and contributes to characterize system dynamics, achieve control, automate experimental protocols and extend the lifespan of the preparations
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Google™ Scholar:Reyes Sánchez, Manuel - Amaducci Szwarc, Rodrigo Vicente - Elices Ocón, Irene del Rosario - Rodríguez Ortiz, Francisco Borja - Varona Martínez, Pablo

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  • Producción científica en acceso abierto de la UAM [16828]

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