Automatic Adaptation of Model Neurons and Connections to Build Hybrid Circuits with Living Networks
Entity
UAM. Departamento de Ingeniería InformáticaPublisher
Springer NatureDate
2020-06-01Citation
10.1007/s12021-019-09440-z
Reyes-Sanchez, M., Amaducci, R., Elices, I., Rodríguez Ortiz, F. B. and Varona, P., Automatic Adaptation of Model Neurons and Connections to Build Hybrid Circuits with Living Networks. Neuroinform 18 (2020): 377–393
ISSN
1539-2791 (print); 1559-0089 (online)DOI
10.1007/s12021-019-09440-zFunded by
This work was supported by MINECO/ FEDER PGC2018-095895-B-I00, DPI2015-65833-P, TIN2017-84452-R and ONRG grant N62909-14-1-N279Project
Gobierno de España. PGC2018-095895-B-I00; Gobierno de España. DPI2015-65833-PEditor's Version
https://doi.org/10.1007/s12021-019-09440-zSubjects
Closed-loop neuroscience; Dynamic clamp; Experiment automation; Hybrid circuit real-time dynamic adaptation; Interacting living and model neurons; InformáticaRights
© Springer NatureAbstract
Hybrid circuits built by creating mono- or bi-directional interactions among living cells and model neurons and synapses are an effective way to study neuron, synaptic and neural network dynamics. However, hybrid circuit technology has been largely underused in the context of neuroscience studies mainly because of the inherent difficulty in implementing and tuning this type of interactions. In this paper, we present a set of algorithms for the automatic adaptation of model neurons and connections in the creation of hybrid circuits with living neural networks. The algorithms perform model time and amplitude scaling, real-time drift adaptation, goal-driven synaptic and model tuning/calibration and also automatic parameter mapping. These algorithms have been implemented in RTHybrid, an open-source library that works with hard real-time constraints. We provide validation examples by building hybrid circuits in a central pattern generator. The results of the validation experiments show that the proposed dynamic adaptation facilitates closed-loop communication among living and artificial model neurons and connections, and contributes to characterize system dynamics, achieve control, automate experimental protocols and extend the lifespan of the preparations
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Google Scholar:Reyes Sánchez, Manuel
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Amaducci Szwarc, Rodrigo Vicente
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Elices Ocón, Irene del Rosario
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Rodríguez Ortiz, Francisco Borja
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Varona Martínez, Pablo
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